Cordero D, Peña JB, Saavedra C (2014) Phylogeographic analysis of nuclear and mitochondrial markers in the clam Ruditapes decussatus uncovers the effects of the last glaciation and endogenous barriers to gene flow. Molecular Phylogenetics and Evolution 71, 274-287.

Leite RB, Miln M, Coppe A, Bortoluzzi S, dos Anjos A, Reza H, Reinhardt R, Cancela ML, Saavedra C, Patarnello T, Bargelloni L (2013) mRNA-Seq and microarray development for the Grooved carpet shellclam, Ruditapes decussatus: a functional approach to unravel host -parasite interactio. BMC Genomics 14, 741.

Navarro A, Sanchez-Fontenla J, Cordero D, Faria M, Peña JB, Saavedra C, Blazquez M, Torreblanca A, Barata C (2013) Genetic and phenoptypic differentiation of zebra mussel populations colonizing Spanish river basins. Ecotoxicology. DOI 10.1007/s10646-013-1084-7.

Milan M, Coppe A, Reinhardt R, Cancela LM, Leite RB, Saavedra C, Ciofi C, Chelazzi G, Patarnello T, Bortoluzzi S, Bargelloni L (2011) Transcriptome sequencing and microarray development for the Manila clam, Ruditapes philippinarum: genomic tools for environmental monitoring. BMC Genomics 12: 234.

Pujolar JM, Marceta T, Saavedra C, Bressan M, Zane L (2010) Inferring the demographic history of the Adriatic Flexopecten complex. Mol. Phylogenet. Evol. 57: 942-947.

Ruiz O, Amat F, Saavedra C, Papeschi A, Cohen RG,  Baxevanis AD, Kappas I, Abatzopoulos TJ, Navarro JC (2008) Genetic characterization of Argentinean Artemia species with different fatty acid profiles. Hydrobiologia 610: 223-234.

Cordero D, Peña JB, Saavedra C (2008) Polymorphisms at three introns in the Manila clam (Ruditapes philippinarum) and the grooved carpet-shell clam (R. decussatus) J. Shellfish Res 27: 301-306.

Tanguy, A., Bierne, N., Saavedra, C., Piña, B., Bachère, E., Kube, M., Bazin, e., Bonhomme, f., Boudry, P., Boulo, V., Boutet, I., Cancela, L., Dossat, C., Favrel, P., Huvet, A., Jarque, S., Jollivet, D., Klages, S., Lapègue, S., Leite, R., Moal, J., Moraga, D., Reinhardt, R., Samain, J.F., Zouros, E., and A. Canario (2008) Increasing genomic information in bivalves through new EST collections in four species: development of new genetic markers ofr environmental studies and genome evolution. Gene 408: 27-36

Theologidis I, Saavedra C, Zouros E (2007) No evidence for absence of paternal mtDNA in male progeny from pair
matings of the mussel Mytilus galloprovincialis. Genetics 176: 1367–1369.

Saavedra, C., and E. Bachère (2006) Bivalve Genomics. Aquaculture 256: 1-14.

Saavedra, C., and J. B. Peña (2004)Phylogenetics of American scallops (Bivalvia: Pectinidae) based on partial 12S and 16S ribosomal RNA gene sequences.Mar. Biol. 150:111-119.

Saavedra, C. and J.B. Peña (2005). Nucleotide diversity and Pleistocene population expansion in Atlantic and Mediterranean scallops (Pecten maximus and  P. jacobaeus) as revealed by the mitochondrial 16S ribosomal RNA gene. J. Exp. Mar. Biol. Ecol. 323:138-150.

Saavedra, C. and J.B. Peña (2004). Phylogenetic relationships of commercial European and Australasian king scallops (Pecten spp.) based on partial 16S ribosomal RNA gene sequences Aquaculture235(1-4): 153-166.

Peña-Llopis, S., M.D. Ferrando and J.B. Peña (2003). Fish tolerance to oganophosphate-induced oxidative stress is dependent on glutathione metabolism and enhanced by N-acetylcysteine. Aquat. Toxicol.65(4): 337-360.

(Best Publication Award on Environmental Research 2004)

Peña-Llopis, S., M.D. Ferrando and J.B. Peña (2003). Increased recovery of brain acetylcholinesterase activity in dichlorvos-intoxicated European eels Anguilla anguilla by bath treatment with N-acetylcysteine. Dis. Aquat. Org.55(3): 237-245.

Peña-Llopis, S., M.D. Ferrando and J.B. Peña (2002). Impaired glutathione redox status is associated with decreased survival in two organophosphate-poisoned marine bivalves. Chemosphere 47(5): 485-497.

Ríos, C., S. Sanz, C. Saavedra and J.B. Peña (2002). Allozyme variation in populations of scallops, Pecten jacobaeus and P. maximus, across the Almeria-Oran front. J. Exp. Mar. Biol. Ecol. 267(2): 223-244.

Peña-Llopis, S., J.B. Peña, E. Sancho, C. Fernández-Vega and M.D. Ferrando (2001). Glutathione-dependent resistance of the European eel Anguilla anguilla to the herbicide molinate. Chemosphere 45(4-5): 671-681.

Peña, S., J.B. Peña, C. Ríos, E. Sancho, C. Fernández and M.D. Ferrando (2000). Role of glutathione in thiobencarb resistance in the European eel Anguilla anguilla. Ecotoxicol. Environ. Safety 46(1): 51-56.

Peña, J.B., C. Ríos, S. Peña and J. Canales (1998). Ultrastructural morphogenesis of pectinid spat from the western Mediterranean: A way to differentiate seven genera. J. Shellfish Res. 17(1): 123-130.

Saavedra, C., M.I. Reyero and E. Zouros (1997). Male-dependent doubly uniparental inheritance of mitochondrial DNA and female-dependent sex-ratio in the mussel Mytilus galloprovincialis. Genetics 145(4):1073-1082.

Saavedra, C. (1997). Low effective sizes in hatchery populations of the European oyster (Ostrea edulis): implications for the management of genetic resources. J. Shellfish Res. 16(2): 441-446.

Peña, J.B., J. Canales, J.M. Adsuara and M.A. Sos (1996). Study of seasonal settlements of five scallop species in the western Mediterranean. Aquacult. Int. 4(3): 253-261.

Ríos, C., J. Canales and J.B. Peña (1996). Genotype-dependent spawning: evidence from a wild population of Pecten jacobaeus (L.) (Bivalvia: Pectinidae). J. Shellfish Res. 15(3): 645-651.

Saavedra, C., D.T. Stewart, R.R. Stanwood and E. Zouros (1996). Species-specific segregation of gender-associated mitochondrial DNA types in an area where two mussel species (Mytilus edulis and M. trossulus) hybridize. Genetics 143(3): 1359-1367.

Saavedra, C., C. Zapata and G. Alvarez (1995). Geographical patterns of variability at allozyme loci in the European oyster Ostrea edulis. Mar. Biol. 122: 95-104.

Serrano, R., F. Hernández,  J.B. Peña,  V. Dosdá and  J. Canales (1995). Toxicity and bioconcentration of selected organophosphorus pesticides in Mytilus galloprovincialis and Venus gallina. Arch. Environ. Contam. Toxicol. 29(2): 284-290.